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Farran's Science Works
Farran's Science Works
  • My Scientific Works
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    • Future projects — plans & ideas
  • Asthma genetics
    • The Genetics of Asthma (2023)
      • Abstract
      • Abbreviations, Acronyms, Terms
      • Table of Contents
      • List of figures and tables
      • Introduction
      • Methods & materials
        • Phase 1 – Data processing & gene selection
        • Phase 2 – Data analysis
        • Phase 3 – Literature research
      • Results
        • Phase 1 – Gene selection
        • Phase 2 – Statistical analysis
        • Phase 3 – Literature research
      • Discussion
        • Phase 2 – Statistical analysis
        • Phase 3 – Literature research
        • Experimental design & limitations
        • Conclusions
      • References
      • Appendices
        • Appendix 1 – Data files
        • Appendix 2 – Orthography
        • Appendix 3 – Text-based tables
        • Appendix 4 – Software list
      • Glossary
  • Urban Biodiversity
    • Regenerating Urban Habitat for Biodiversity & Sequestering Carbon (2022)
      • Executive summary
      • Context
      • Tree planting and natural regeneration
      • Regeneration sites
      • Risks & unknowns
      • Recommendation
      • References
      • Bibliography
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  1. Asthma genetics
  2. The Genetics of Asthma (2023)

List of figures and tables

Tables

Table 1: Summary of Phase 2 statistical analysis results of gene expression in pairwise comparison sets. 12

Table 2: Distribution of study genes throughout key cells and cellular components in asthma. 14

Table 3: Supplementary files list, describing source, type, content and location. 26

Figures

Figure 1: Spreadsheet of initial gene selection analysis of original dataset. 11

Figure 2: Comparison between DGE ratios of STAT2 and OAS genes, relative to control sample δ. 13

Figure 3. Pathway WP4880: IFN-I inducing JAK-STAT cascade, in ‘Host-pathogen interaction of human coronaviruses’. (WikiPathways, 2021) 14

Figure 4: Detail of JAK-STAT cascade in WP4880, showing STAT1, STAT2, OAS1, OAS2 & OAS3. (WikiPathways, 2021) 15

Figure 5: Generalized pathway diagram demonstrating the potential benefits of avoiding the default OAS-RNaseL pathway. 20

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Last updated 6 months ago